Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate 5-kinase | CKY39_RS07010 | Not Available | Positive | 1558535 - 1559674 | 40306.6 |
| cnp1-like family protein | CKY39_RS07015 | Not Available | Negative | 1559712 - 1560305 | 21733.0 |
| rna pyrophosphohydrolase | CKY39_RS07020 | Not Available | Negative | 1560253 - 1560921 | 26230.9 |
| proline--trna ligase | CKY39_RS07025 | Not Available | Positive | 1561057 - 1562802 | 63777.8 |
| lytic transglycosylase domain-containing protein | CKY39_RS07030 | Not Available | Positive | 1562799 - 1563455 | 24212.2 |
| hemolysin family protein | CKY39_RS07035 | Not Available | Negative | 1563466 - 1564785 | 48624.2 |
| grx4 family monothiol glutaredoxin | CKY39_RS07040 | Not Available | Negative | 1564878 - 1565207 | 11865.3 |
| peptide chain release factor n(5)-glutamine methyltransferase | CKY39_RS07045 | Not Available | Negative | 1565240 - 1566097 | 30322.9 |
| peptide chain release factor 1 | CKY39_RS07050 | Not Available | Negative | 1566097 - 1567185 | 40628.0 |
| glutamyl-trna reductase | CKY39_RS07055 | Not Available | Negative | 1567291 - 1568562 | 45818.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
