Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mboat family o-acyltransferase | CKY39_RS06960 | Not Available | Negative | 1549154 - 1550647 | 55950.7 |
| dephospho-coa kinase | CKY39_RS06965 | Not Available | Negative | 1550724 - 1551335 | 21210.6 |
| prepilin peptidase | CKY39_RS06970 | Not Available | Negative | 1551349 - 1552314 | 34244.5 |
| type ii secretion system f family protein | CKY39_RS06975 | Not Available | Negative | 1552314 - 1553543 | 44753.1 |
| type iv-a pilus assembly atpase pilb | CKY39_RS06980 | Not Available | Negative | 1553568 - 1555301 | 62572.5 |
| Trna-pro | Not Available | Not Available | Positive | 1555417 - 1555493 | Not Available |
| polyprenyl synthetase family protein | CKY39_RS06990 | Not Available | Negative | 1555546 - 1556538 | 35169.2 |
| 50s ribosomal protein l21 | CKY39_RS06995 | Not Available | Positive | 1556721 - 1557032 | 11196.7 |
| 50s ribosomal protein l27 | CKY39_RS07000 | Not Available | Positive | 1557045 - 1557305 | 8933.88 |
| obg family gtpase cgta | CKY39_RS07005 | Not Available | Positive | 1557378 - 1558454 | 38881.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
