Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal-phosphate dependent enzyme | CKY39_RS06910 | Not Available | Positive | 1537917 - 1539152 | 43209.4 |
| dcia family protein | CKY39_RS06915 | Not Available | Negative | 1539174 - 1539488 | 10940.5 |
| preprotein translocase subunit seca | CKY39_RS06920 | Not Available | Positive | 1539686 - 1542472 | 104491.0 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | CKY39_RS06925 | Not Available | Positive | 1542508 - 1543737 | 43085.5 |
| atp-binding protein | CKY39_RS06930 | Not Available | Positive | 1543734 - 1544609 | 32495.5 |
| nudix domain-containing protein | CKY39_RS06935 | Not Available | Positive | 1544606 - 1545064 | 16674.9 |
| acyltransferase family protein | CKY39_RS06940 | Not Available | Positive | 1545102 - 1547066 | 72058.2 |
| dna gyrase inhibitor yacg | CKY39_RS06945 | Not Available | Negative | 1547106 - 1547315 | 7869.23 |
| cell division protein zapd | CKY39_RS06950 | Not Available | Negative | 1547324 - 1548079 | 28654.4 |
| hypothetical protein | CKY39_RS06955 | Not Available | Negative | 1548116 - 1549147 | 39519.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
