Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | CKY39_RS06710 | Not Available | Negative | 1496590 - 1497627 | 37310.7 |
| duf58 domain-containing protein | CKY39_RS06715 | Not Available | Negative | 1497624 - 1498619 | 37102.6 |
| aaa family atpase | CKY39_RS06720 | Not Available | Negative | 1498600 - 1499625 | 37400.6 |
| s1c family serine protease | CKY39_RS06725 | Not Available | Negative | 1499646 - 1500644 | 33878.7 |
| tatd family hydrolase | CKY39_RS06730 | Not Available | Positive | 1500733 - 1501593 | 31006.1 |
| hypothetical protein | CKY39_RS06735 | Not Available | Positive | 1501724 - 1502209 | 16391.2 |
| dna-deoxyinosine glycosylase | CKY39_RS06740 | Not Available | Positive | 1502315 - 1502857 | 19716.7 |
| spermidine synthase | CKY39_RS06745 | Not Available | Positive | 1502857 - 1503639 | 29130.0 |
| gspe/pule family protein | CKY39_RS06750 | Not Available | Positive | 1503650 - 1505437 | 65706.8 |
| tripartite tricarboxylate transporter tctb family protein | CKY39_RS06755 | Not Available | Positive | 1505655 - 1506143 | 17240.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
