Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,2-phenylacetyl-coa epoxidase subunit paae | CKY39_RS06660 | Not Available | Negative | 1488808 - 1489893 | 39624.4 |
| 1,2-phenylacetyl-coa epoxidase subunit paad | CKY39_RS06665 | Not Available | Negative | 1489906 - 1490430 | 18880.7 |
| 1,2-phenylacetyl-coa epoxidase subunit paac | CKY39_RS06670 | Not Available | Negative | 1490430 - 1491209 | 28779.2 |
| 1,2-phenylacetyl-coa epoxidase subunit paab | CKY39_RS06675 | Not Available | Negative | 1491227 - 1491523 | 11307.4 |
| 1,2-phenylacetyl-coa epoxidase subunit paaa | CKY39_RS06680 | Not Available | Negative | 1491520 - 1492530 | 38191.2 |
| phenylacetate--coa ligase paak | CKY39_RS06685 | Not Available | Negative | 1492571 - 1493842 | 46860.0 |
| hydroxyphenylacetyl-coa thioesterase paai | CKY39_RS06690 | Not Available | Negative | 1493895 - 1494341 | 15904.9 |
| enoyl-coa hydratase-related protein | CKY39_RS06695 | Not Available | Negative | 1494343 - 1495146 | 27285.0 |
| phenylacetic acid degradation protein paay | CKY39_RS06700 | Not Available | Positive | 1495297 - 1495899 | 21225.6 |
| tetr/acrr family transcriptional regulator | CKY39_RS06705 | Not Available | Positive | 1495971 - 1496606 | 23294.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
