Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS06610 | Not Available | Positive | 1478785 - 1479261 | 17456.5 |
| flavin reductase family protein | CKY39_RS06615 | Not Available | Positive | 1479354 - 1479962 | 22014.2 |
| hypothetical protein | CKY39_RS06620 | Not Available | Positive | 1479968 - 1480387 | 14604.4 |
| methyltransferase family protein | CKY39_RS06625 | Not Available | Negative | 1480368 - 1480928 | 21297.4 |
| sdr family nad(p)-dependent oxidoreductase | CKY39_RS06630 | Not Available | Negative | 1480958 - 1481716 | 25891.0 |
| phenylacetic acid degradation bifunctional protein paaz | CKY39_RS06635 | Not Available | Negative | 1481716 - 1483767 | 72288.5 |
| abc transporter atp-binding protein | CKY39_RS06640 | Not Available | Negative | 1483826 - 1484557 | 26817.0 |
| abc transporter permease subunit | CKY39_RS06645 | Not Available | Negative | 1484554 - 1486455 | 66446.0 |
| branched-chain amino acid abc transporter permease | CKY39_RS06650 | Not Available | Negative | 1486452 - 1487480 | 36284.5 |
| abc transporter substrate-binding protein | CKY39_RS06655 | Not Available | Negative | 1487609 - 1488754 | 40041.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
