Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactonase family protein | CKY39_RS06460 | Not Available | Positive | 1446337 - 1447533 | 41717.1 |
| abc transporter permease | CKY39_RS06465 | Not Available | Positive | 1447530 - 1448486 | 33870.4 |
| abc transporter permease | CKY39_RS06470 | Not Available | Positive | 1448490 - 1449329 | 30149.2 |
| abc transporter atp-binding protein | CKY39_RS06475 | Not Available | Positive | 1449329 - 1450366 | 37457.8 |
| abc transporter atp-binding protein | CKY39_RS06480 | Not Available | Positive | 1450366 - 1451370 | 36233.6 |
| amino acid deaminase | CKY39_RS06485 | Not Available | Positive | 1451367 - 1452674 | 47329.5 |
| murr/rpir family transcriptional regulator | CKY39_RS06490 | Not Available | Positive | 1452686 - 1453603 | 32495.9 |
| n-acyl-d-amino-acid deacylase family protein | CKY39_RS06495 | Not Available | Positive | 1453600 - 1455069 | 52679.4 |
| lysr family transcriptional regulator | CKY39_RS06500 | Not Available | Negative | 1455200 - 1456117 | 33922.3 |
| amino acid abc transporter substrate-binding protein | CKY39_RS06505 | Not Available | Positive | 1456251 - 1457153 | 32257.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
