Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nrsf family protein | CKY39_RS06360 | Not Available | Negative | 1419105 - 1419746 | 22667.9 |
| sigma-70 family rna polymerase sigma factor | CKY39_RS06365 | Not Available | Negative | 1419743 - 1420291 | 20028.9 |
| duf2282 domain-containing protein | CKY39_RS06370 | Not Available | Positive | 1420468 - 1420755 | 9626.86 |
| duf692 domain-containing protein | CKY39_RS06375 | Not Available | Positive | 1420774 - 1421613 | 31082.6 |
| dna-binding domain-containing protein | CKY39_RS06380 | Not Available | Positive | 1421610 - 1422422 | 29026.3 |
| doxx family protein | CKY39_RS06385 | Not Available | Positive | 1422419 - 1422898 | 17644.7 |
| hypothetical protein | CKY39_RS06390 | Not Available | Negative | 1423135 - 1423728 | 22704.9 |
| single-stranded-dna-specific exonuclease recj | CKY39_RS06395 | Not Available | Negative | 1423778 - 1425499 | 61495.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS06400 | Not Available | Negative | 1425496 - 1426472 | 35066.9 |
| lipoprotein-releasing abc transporter permease subunit | CKY39_RS06405 | Not Available | Positive | 1426595 - 1427851 | 45540.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
