Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS06225 | Not Available | Positive | 1383580 - 1384365 | 28318.6 |
| hypothetical protein | CKY39_RS06230 | Not Available | Positive | 1384362 - 1384586 | 8623.19 |
| helix-turn-helix domain-containing protein | CKY39_RS06235 | Not Available | Negative | 1384629 - 1384904 | 10161.3 |
| hypothetical protein | CKY39_RS06240 | Not Available | Positive | 1385161 - 1385625 | 16414.7 |
| hypothetical protein | CKY39_RS06245 | Not Available | Positive | 1385729 - 1385941 | 7560.74 |
| hypothetical protein | CKY39_RS06250 | Not Available | Positive | 1385938 - 1386183 | 8791.04 |
| j domain-containing protein | CKY39_RS06255 | Not Available | Positive | 1386195 - 1387325 | 42351.1 |
| hypothetical protein | CKY39_RS33685 | Not Available | Negative | 1387528 - 1387944 | 15655.6 |
| yfji family protein | CKY39_RS06265 | Not Available | Positive | 1389199 - 1390629 | 53572.2 |
| secretin and tonb n-terminal domain-containing protein | CKY39_RS06270 | Not Available | Positive | 1392028 - 1392630 | 21403.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
