Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease subunit | CKY39_RS06175 | Not Available | Negative | 1375009 - 1376904 | 66488.7 |
| trap transporter substrate-binding protein | CKY39_RS06180 | Not Available | Negative | 1376911 - 1377930 | 36877.3 |
| laci family dna-binding transcriptional regulator | CKY39_RS06185 | Not Available | Positive | 1378056 - 1379111 | 38307.2 |
| hypothetical protein | CKY39_RS06190 | Not Available | Positive | 1379550 - 1379936 | 12557.9 |
| duf932 domain-containing protein | CKY39_RS06195 | Not Available | Positive | 1380149 - 1381138 | 36620.8 |
| yqaj viral recombinase family protein | CKY39_RS06200 | Not Available | Positive | 1381353 - 1381985 | 23212.8 |
| hypothetical protein | CKY39_RS06205 | Not Available | Positive | 1381987 - 1382526 | 20007.9 |
| hypothetical protein | CKY39_RS33110 | Not Available | Positive | 1382523 - 1382741 | 7976.52 |
| hypothetical protein | CKY39_RS06215 | Not Available | Positive | 1382831 - 1383118 | 10380.2 |
| hypothetical protein | CKY39_RS06220 | Not Available | Positive | 1383099 - 1383359 | 9431.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
