Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS20580 | Not Available | Negative | 4435304 - 4435711 | 14337.5 |
| Putative head-tail attachment protein | CKY39_RS20585 | Not Available | Negative | 4435713 - 4435997 | 9977.63 |
| Putative major capsid protein | CKY39_RS20590 | Not Available | Negative | 4436002 - 4437876 | 65458.9 |
| Putative portal protein | CKY39_RS34785 | Not Available | Negative | 4437927 - 4438721 | 28862.7 |
| hypothetical protein | CKY39_RS34790 | Not Available | Positive | 4438733 - 4439410 | 25029.3 |
| Putative phage-related protein | CKY39_RS20605 | Not Available | Negative | 4439481 - 4440026 | 19774.4 |
| hypothetical protein | CKY39_RS20610 | Not Available | Positive | 4440183 - 4441187 | 38740.4 |
| mor transcription activator family protein | CKY39_RS20615 | Not Available | Negative | 4441241 - 4441558 | 11976.5 |
| Terminase large subunit a | CKY39_RS20620 | Not Available | Negative | 4441552 - 4443747 | 82177.3 |
| hypothetical protein | CKY39_RS20625 | Not Available | Negative | 4443744 - 4444256 | 18431.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
