Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | CKY39_RS06080 | Not Available | Positive | 1354324 - 1354986 | 23043.9 |
| degt/dnrj/eryc1/strs family aminotransferase | CKY39_RS06085 | Not Available | Positive | 1354993 - 1356180 | 43410.6 |
| vanz family protein | CKY39_RS06090 | Not Available | Positive | 1356210 - 1356551 | 12355.6 |
| polysaccharide biosynthesis tyrosine autokinase | CKY39_RS06095 | Not Available | Negative | 1356678 - 1358933 | 81629.3 |
| low molecular weight protein-tyrosine-phosphatase | CKY39_RS06100 | Not Available | Negative | 1358930 - 1359364 | 15607.3 |
| polysaccharide biosynthesis protein | CKY39_RS06105 | Not Available | Positive | 1359811 - 1361814 | 72664.3 |
| yjbh domain-containing protein | CKY39_RS06110 | Not Available | Negative | 1361915 - 1364899 | 109086.0 |
| yjbf family lipoprotein | CKY39_RS06115 | Not Available | Negative | 1364967 - 1365584 | 22449.4 |
| hypothetical protein | CKY39_RS06120 | Not Available | Negative | 1365719 - 1366024 | 9520.26 |
| response regulator | CKY39_RS06125 | Not Available | Positive | 1366505 - 1367110 | 21154.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
