Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligosaccharide flippase family protein | CKY39_RS06045 | Not Available | Positive | 1343434 - 1344717 | 46188.6 |
| glycosyltransferase | CKY39_RS33095 | Not Available | Positive | 1344710 - 1345711 | 38333.1 |
| hypothetical protein | CKY39_RS33100 | Not Available | Positive | 1345760 - 1346743 | 36619.1 |
| hypothetical protein | CKY39_RS33105 | Not Available | Positive | 1346868 - 1347977 | 41596.0 |
| glycosyltransferase | CKY39_RS06050 | Not Available | Positive | 1348009 - 1349130 | 42460.6 |
| polysaccharide biosynthesis protein | CKY39_RS06055 | Not Available | Positive | 1349150 - 1350196 | 38842.8 |
| udp-2-acetamido-2,6-beta-l-arabino-hexul-4-ose reductase | CKY39_RS06060 | Not Available | Positive | 1350201 - 1351328 | 41451.2 |
| udp-n-acetyl glucosamine 2-epimerase | CKY39_RS06065 | Not Available | Positive | 1351350 - 1352486 | 42596.3 |
| glycosyltransferase family 4 protein | CKY39_RS06070 | Not Available | Positive | 1352490 - 1353725 | 44880.9 |
| sugar transferase | CKY39_RS06075 | Not Available | Positive | 1353722 - 1354327 | 23118.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
