Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase family protein | CKY39_RS06000 | Not Available | Negative | 1331260 - 1332336 | 40294.1 |
| hypothetical protein | CKY39_RS34130 | Not Available | Positive | 1333002 - 1333844 | 31313.8 |
| hypothetical protein | CKY39_RS34135 | Not Available | Positive | 1333868 - 1334506 | 23843.9 |
| s1c family serine protease | CKY39_RS06010 | Not Available | Negative | 1334881 - 1336041 | 40279.3 |
| mfs transporter | CKY39_RS06015 | Not Available | Positive | 1336333 - 1337685 | 48269.7 |
| nif3-like dinuclear metal center hexameric protein | CKY39_RS06020 | Not Available | Positive | 1337682 - 1338455 | 27475.7 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | CKY39_RS06025 | Not Available | Positive | 1338452 - 1339492 | 35593.3 |
| large conductance mechanosensitive channel protein mscl | CKY39_RS06030 | Not Available | Negative | 1339515 - 1339946 | 15373.3 |
| polysaccharide biosynthesis/export family protein | CKY39_RS06035 | Not Available | Positive | 1340698 - 1341774 | 38403.1 |
| vi polysaccharide biosynthesis udp-n-acetylglucosamine c-6 dehydrogenase tvib | CKY39_RS06040 | Not Available | Positive | 1341913 - 1343196 | 46296.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
