Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dicarboxylate/amino acid:cation symporter | CKY39_RS05950 | Not Available | Negative | 1324672 - 1325979 | 46581.6 |
| d-hexose-6-phosphate mutarotase | CKY39_RS05955 | Not Available | Positive | 1326112 - 1326945 | 30144.0 |
| imidazole glycerol phosphate synthase subunit hisf | CKY39_RS05960 | Not Available | Positive | 1326968 - 1327753 | 27258.4 |
| phosphoribosyl-amp cyclohydrolase | CKY39_RS05965 | Not Available | Positive | 1327796 - 1328185 | 14822.6 |
| phosphoribosyl-atp diphosphatase | CKY39_RS05970 | Not Available | Positive | 1328182 - 1328571 | 13890.3 |
| duf4870 family protein | CKY39_RS05975 | Not Available | Positive | 1328597 - 1328986 | 14692.2 |
| histidine triad nucleotide-binding protein | CKY39_RS05980 | Not Available | Positive | 1328976 - 1329335 | 13146.0 |
| sec-independent protein translocase subunit tata | CKY39_RS05985 | Not Available | Positive | 1329400 - 1329648 | 8685.41 |
| sec-independent protein translocase protein tatb | CKY39_RS05990 | Not Available | Positive | 1329668 - 1330129 | 16953.5 |
| twin-arginine translocase subunit tatc | CKY39_RS05995 | Not Available | Positive | 1330203 - 1331018 | 29424.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
