Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | CKY39_RS05900 | Not Available | Positive | 1316103 - 1316744 | 23086.2 |
| histidinol dehydrogenase | CKY39_RS05905 | Not Available | Positive | 1316756 - 1318078 | 46731.7 |
| hypothetical protein | CKY39_RS05910 | Not Available | Positive | 1318116 - 1318943 | 29931.2 |
| hypothetical protein | CKY39_RS05915 | Not Available | Positive | 1318956 - 1319336 | 13773.7 |
| histidinol-phosphate transaminase | CKY39_RS05920 | Not Available | Positive | 1319333 - 1320436 | 39409.0 |
| imidazoleglycerol-phosphate dehydratase hisb | CKY39_RS05925 | Not Available | Positive | 1320468 - 1321049 | 20939.2 |
| imidazole glycerol phosphate synthase subunit hish | CKY39_RS05930 | Not Available | Positive | 1321069 - 1321728 | 23863.3 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | CKY39_RS05935 | Not Available | Positive | 1321792 - 1322535 | 26008.1 |
| aaa family atpase | CKY39_RS05940 | Not Available | Positive | 1322556 - 1323728 | 42308.7 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS05945 | Not Available | Negative | 1323747 - 1324660 | 33541.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
