Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid asymmetry maintenance abc transporter permease subunit mlae | CKY39_RS05850 | Not Available | Positive | 1307860 - 1308642 | 27768.7 |
| outer membrane lipid asymmetry maintenance protein mlad | CKY39_RS05855 | Not Available | Positive | 1308680 - 1309168 | 17231.6 |
| vacj family lipoprotein | CKY39_RS05860 | Not Available | Positive | 1309165 - 1309914 | 27155.9 |
| phospholipid-binding protein mlac | CKY39_RS05865 | Not Available | Positive | 1310081 - 1310743 | 24027.9 |
| lipid asymmetry maintenance protein mlab | CKY39_RS05870 | Not Available | Positive | 1310756 - 1311031 | 9555.66 |
| serine hydrolase domain-containing protein | CKY39_RS05875 | Not Available | Negative | 1311042 - 1312400 | 49329.0 |
| abc transporter atp-binding protein | CKY39_RS05880 | Not Available | Positive | 1312804 - 1313751 | 34626.0 |
| abc transporter permease | CKY39_RS05885 | Not Available | Positive | 1313748 - 1314512 | 27841.8 |
| bola family protein | CKY39_RS05890 | Not Available | Positive | 1314532 - 1314774 | 8989.67 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | CKY39_RS05895 | Not Available | Positive | 1314817 - 1316106 | 45834.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
