Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | CKY39_RS05700 | Not Available | Positive | 1271218 - 1273344 | 77019.6 |
| methionine adenosyltransferase | CKY39_RS05705 | Not Available | Negative | 1273420 - 1274604 | 43112.1 |
| lysophospholipid acyltransferase family protein | CKY39_RS05710 | Not Available | Positive | 1274836 - 1275735 | 32497.7 |
| lipid a biosynthesis acyltransferase | CKY39_RS05715 | Not Available | Positive | 1275732 - 1276616 | 33049.3 |
| alpha/beta fold hydrolase | CKY39_RS05720 | Not Available | Negative | 1276610 - 1277524 | 33762.5 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | CKY39_RS05725 | Not Available | Negative | 1277615 - 1278352 | 26678.3 |
| c-type cytochrome | CKY39_RS05730 | Not Available | Positive | 1278423 - 1279094 | 23383.9 |
| cytochrome c biogenesis protein resb | CKY39_RS05735 | Not Available | Positive | 1279216 - 1281396 | 79127.6 |
| c-type cytochrome biogenesis protein ccsb | CKY39_RS05740 | Not Available | Positive | 1281393 - 1282712 | 49225.4 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | CKY39_RS05745 | Not Available | Positive | 1282829 - 1283842 | 37571.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
