Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Portal protein | CKY39_RS19650 | Not Available | Negative | 4235099 - 4236373 | 47269.0 |
| Gp79 | CKY39_RS19655 | Not Available | Negative | 4236385 - 4238061 | 61271.8 |
| Attr | Not Available | Not Available | Positive | 4237353 - 4237364 | Not Available |
| Hypothetical protein | CKY39_RS33400 | Not Available | Negative | 4238065 - 4238343 | 9481.56 |
| Putative hnh endonuclease | CKY39_RS19660 | Not Available | Negative | 4238485 - 4238799 | 11748.0 |
| Putative tail protein b | CKY39_RS20555 | Not Available | Negative | 4427528 - 4428718 | 42136.1 |
| Putative tail protein b | CKY39_RS20560 | Not Available | Negative | 4428739 - 4431111 | 81935.8 |
| Hypothetical protein | CKY39_RS20565 | Not Available | Negative | 4431108 - 4431503 | 14013.0 |
| Tail tape measure protein | CKY39_RS20570 | Not Available | Negative | 4431506 - 4434379 | 98240.9 |
| Virion associated protein | CKY39_RS20575 | Not Available | Negative | 4434495 - 4435283 | 27840.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
