Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | CKY39_RS05550 | Not Available | Positive | 1236986 - 1238539 | 56353.9 |
| duf805 domain-containing protein | CKY39_RS05555 | Not Available | Positive | 1238713 - 1239045 | 12269.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | CKY39_RS05560 | Not Available | Negative | 1239104 - 1240168 | 37222.8 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS05565 | Not Available | Negative | 1240210 - 1241190 | 33879.0 |
| lysr family transcriptional regulator | CKY39_RS05570 | Not Available | Positive | 1241284 - 1242219 | 33705.1 |
| abc transporter substrate-binding protein | CKY39_RS05575 | Not Available | Positive | 1242403 - 1243713 | 47424.0 |
| carbohydrate abc transporter permease | CKY39_RS05580 | Not Available | Positive | 1243772 - 1244629 | 32132.4 |
| carbohydrate abc transporter permease | CKY39_RS05585 | Not Available | Positive | 1244643 - 1245467 | 30084.4 |
| abc transporter atp-binding protein | CKY39_RS05590 | Not Available | Positive | 1245485 - 1246522 | 37273.3 |
| d-arabinitol 4-dehydrogenase | CKY39_RS05595 | Not Available | Positive | 1246613 - 1247992 | 49609.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
