Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CKY39_RS05500 | Not Available | Positive | 1224523 - 1225563 | 38208.3 |
| glycosyltransferase family 2 protein | CKY39_RS05505 | Not Available | Positive | 1225560 - 1227521 | 71576.4 |
| 4,5-dopa dioxygenase extradiol | CKY39_RS05510 | Not Available | Positive | 1227624 - 1228529 | 32173.6 |
| glucose-6-phosphate dehydrogenase | CKY39_RS05515 | Not Available | Negative | 1228555 - 1230027 | 54712.2 |
| abc transporter substrate-binding protein | CKY39_RS05520 | Not Available | Positive | 1230171 - 1231181 | 36328.5 |
| abc transporter permease | CKY39_RS05525 | Not Available | Positive | 1231182 - 1233455 | 80142.1 |
| abc transporter atp-binding protein | CKY39_RS05530 | Not Available | Positive | 1233452 - 1234492 | 37059.8 |
| had family hydrolase | CKY39_RS05535 | Not Available | Positive | 1234505 - 1235167 | 24427.4 |
| lipocalin family protein | CKY39_RS05540 | Not Available | Negative | 1235113 - 1235784 | 24445.1 |
| transaldolase | CKY39_RS05545 | Not Available | Positive | 1236027 - 1236983 | 34337.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
