Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS05450 | Not Available | Positive | 1212978 - 1214108 | 42481.1 |
| porin | CKY39_RS05455 | Not Available | Negative | 1214203 - 1215486 | 45093.7 |
| osmc family protein | CKY39_RS05460 | Not Available | Positive | 1215758 - 1216207 | 15816.0 |
| 2-polyprenyl-3-methyl-6-methoxy-1,4- benzoquinone monooxygenase | CKY39_RS05465 | Not Available | Negative | 1216233 - 1216862 | 22496.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS05470 | Not Available | Positive | 1217145 - 1218367 | 41608.3 |
| abc transporter permease | CKY39_RS05475 | Not Available | Positive | 1218551 - 1219531 | 36001.5 |
| m20 aminoacylase family protein | CKY39_RS05480 | Not Available | Positive | 1219533 - 1220807 | 44628.5 |
| abc transporter substrate-binding protein | CKY39_RS05485 | Not Available | Positive | 1220839 - 1222419 | 57989.5 |
| abc transporter permease | CKY39_RS05490 | Not Available | Positive | 1222524 - 1223435 | 32410.3 |
| abc transporter atp-binding protein | CKY39_RS05495 | Not Available | Positive | 1223456 - 1224526 | 38373.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
