Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspm | CKY39_RS05405 | Not Available | Negative | 1205710 - 1206261 | 19433.6 |
| type ii secretion system protein gspl | CKY39_RS05410 | Not Available | Negative | 1206258 - 1207469 | 42980.9 |
| type ii secretion system minor pseudopilin gspk | CKY39_RS05415 | Not Available | Negative | 1207601 - 1208647 | 36520.4 |
| type ii secretion system protein j | CKY39_RS05420 | Not Available | Negative | 1208644 - 1209324 | 24345.2 |
| type ii secretion system minor pseudopilin gspi | CKY39_RS05425 | Not Available | Negative | 1209324 - 1209704 | 13300.3 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | CKY39_RS05430 | Not Available | Negative | 1209701 - 1210207 | 17434.3 |
| type ii secretion system major pseudopilin gspg | CKY39_RS05435 | Not Available | Negative | 1210182 - 1210622 | 16030.3 |
| hypothetical protein | CKY39_RS33085 | Not Available | Negative | 1210684 - 1210974 | 9054.23 |
| hypothetical protein | CKY39_RS33090 | Not Available | Negative | 1211026 - 1211250 | 6813.09 |
| threonine ammonia-lyase, biosynthetic | CKY39_RS05445 | Not Available | Negative | 1211339 - 1212904 | 56598.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
