Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | CKY39_RS05355 | Not Available | Negative | 1190739 - 1191641 | 32319.4 |
| phosphocholine-specific phospholipase c | CKY39_RS05360 | Not Available | Negative | 1191689 - 1193932 | 82385.2 |
| phosphocholine-specific phospholipase c | CKY39_RS05365 | Not Available | Negative | 1193941 - 1196130 | 80037.7 |
| hypothetical protein | CKY39_RS05370 | Not Available | Negative | 1196182 - 1196364 | 5945.41 |
| lamg-like jellyroll fold domain-containing protein | CKY39_RS05375 | Not Available | Negative | 1196403 - 1198550 | 74930.0 |
| 5'-nucleotidase | CKY39_RS05380 | Not Available | Negative | 1198947 - 1199846 | 33057.6 |
| type ii secretion system inner membrane protein gspf | CKY39_RS05385 | Not Available | Negative | 1199869 - 1201113 | 43657.0 |
| gspe/pule family protein | CKY39_RS05390 | Not Available | Negative | 1201123 - 1202514 | 49958.1 |
| type ii secretion system secretin gspd | CKY39_RS05395 | Not Available | Negative | 1202542 - 1204875 | 81246.9 |
| type ii secretion system protein n | CKY39_RS05400 | Not Available | Negative | 1204883 - 1205686 | 28370.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
