Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS33080 | Not Available | Negative | 1180514 - 1181254 | 27946.6 |
| energy transducer tonb | CKY39_RS05310 | Not Available | Negative | 1181393 - 1181782 | 13924.6 |
| tripartite tricarboxylate transporter tctb family protein | CKY39_RS05315 | Not Available | Positive | 1182042 - 1182428 | 13486.3 |
| tripartite tricarboxylate transporter permease | CKY39_RS05320 | Not Available | Positive | 1182439 - 1183962 | 53751.2 |
| plp-dependent aminotransferase family protein | CKY39_RS05325 | Not Available | Negative | 1184010 - 1185431 | 51277.5 |
| duf2970 domain-containing protein | CKY39_RS05330 | Not Available | Positive | 1185531 - 1185719 | 6479.32 |
| c-type cytochrome | CKY39_RS05335 | Not Available | Positive | 1185719 - 1186444 | 25540.9 |
| c-type cytochrome | CKY39_RS05340 | Not Available | Positive | 1186452 - 1187750 | 45813.6 |
| 8-oxoguanine deaminase | CKY39_RS05345 | Not Available | Negative | 1187772 - 1189208 | 51322.4 |
| nucleobase:cation symporter-2 family protein | CKY39_RS05350 | Not Available | Negative | 1189205 - 1190539 | 45979.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
