Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein/permease | CKY39_RS05265 | Not Available | Negative | 1169449 - 1171260 | 66963.5 |
| phosphonate degradation hd-domain oxygenase | CKY39_RS05270 | Not Available | Negative | 1171374 - 1171934 | 20255.4 |
| putative 2-aminoethylphosphonate abc transporter substrate-binding protein | CKY39_RS05275 | Not Available | Positive | 1172160 - 1173176 | 36976.5 |
| abc transporter atp-binding protein | CKY39_RS05280 | Not Available | Positive | 1173294 - 1174367 | 38213.5 |
| putative 2-aminoethylphosphonate abc transporter permease subunit | CKY39_RS05285 | Not Available | Positive | 1174692 - 1176401 | 61036.8 |
| tigr03364 family fad-dependent oxidoreductase | CKY39_RS05290 | Not Available | Positive | 1176413 - 1177534 | 40509.5 |
| phosphonoacetaldehyde hydrolase | CKY39_RS05295 | Not Available | Positive | 1177575 - 1178408 | 29623.3 |
| hypothetical protein | CKY39_RS33680 | Not Available | Positive | 1178490 - 1178639 | 5062.55 |
| gnat family n-acetyltransferase | CKY39_RS05300 | Not Available | Negative | 1178680 - 1179132 | 16202.3 |
| mfs transporter | CKY39_RS05305 | Not Available | Positive | 1179231 - 1180499 | 44315.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
