Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ilvd/edd family dehydratase | CKY39_RS05215 | Not Available | Positive | 1156574 - 1158310 | 61891.4 |
| dihydrodipicolinate synthase family protein | CKY39_RS05220 | Not Available | Positive | 1158307 - 1159236 | 33981.1 |
| hypothetical protein | CKY39_RS05225 | Not Available | Negative | 1159286 - 1159555 | 10135.2 |
| hypothetical protein | CKY39_RS05230 | Not Available | Negative | 1159704 - 1160195 | 16629.1 |
| hypothetical protein | CKY39_RS05235 | Not Available | Negative | 1160244 - 1160660 | 14377.0 |
| cyanophycin synthetase | CKY39_RS05240 | Not Available | Negative | 1160868 - 1163435 | 90558.6 |
| cyanophycin synthetase | CKY39_RS05245 | Not Available | Negative | 1163523 - 1165766 | 79555.2 |
| abc transporter atp-binding protein | CKY39_RS05250 | Not Available | Positive | 1165906 - 1168194 | 83290.8 |
| duf1854 domain-containing protein | CKY39_RS05255 | Not Available | Positive | 1168194 - 1168676 | 17406.7 |
| 7-cyano-7-deazaguanine synthase quec | CKY39_RS05260 | Not Available | Positive | 1168763 - 1169467 | 25915.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
