Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | CKY39_RS19605 | Not Available | Negative | 4229757 - 4229978 | 8304.04 |
| Hypothetical protein | CKY39_RS19610 | Not Available | Negative | 4230062 - 4230373 | 11741.2 |
| Tail protein | CKY39_RS19615 | Not Available | Negative | 4230373 - 4231020 | 22632.7 |
| Conserved phage protein | CKY39_RS19620 | Not Available | Negative | 4231130 - 4231489 | 12729.1 |
| Hypothetical protein | CKY39_RS19625 | Not Available | Negative | 4231486 - 4231968 | 17229.4 |
| Putative head-tail adaptor | CKY39_RS19630 | Not Available | Negative | 4231961 - 4232290 | 11870.5 |
| Phage head-tail connector | CKY39_RS19635 | Not Available | Negative | 4232287 - 4232766 | 16951.4 |
| Gp75 | CKY39_RS33765 | Not Available | Negative | 4232769 - 4232933 | 5842.85 |
| Major capsid protein | CKY39_RS19640 | Not Available | Negative | 4232947 - 4234281 | 46396.0 |
| Gp77 | CKY39_RS19645 | Not Available | Negative | 4234285 - 4235121 | 29403.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
