Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | CKY39_RS05165 | Not Available | Positive | 1144795 - 1145589 | 28003.4 |
| lysr family transcriptional regulator | CKY39_RS05170 | Not Available | Negative | 1145590 - 1146549 | 35374.8 |
| aldehyde dehydrogenase family protein | CKY39_RS05175 | Not Available | Positive | 1146697 - 1148151 | 51620.8 |
| abc transporter substrate-binding protein | CKY39_RS05180 | Not Available | Positive | 1148189 - 1149154 | 34972.4 |
| multiple monosaccharide abc transporter substrate-binding protein | CKY39_RS05185 | Not Available | Positive | 1149167 - 1150237 | 38456.2 |
| multiple monosaccharide abc transporter atp-binding protein | CKY39_RS05190 | Not Available | Positive | 1150270 - 1151796 | 55180.2 |
| multiple monosaccharide abc transporter permease | CKY39_RS05195 | Not Available | Positive | 1151783 - 1152988 | 42383.3 |
| sugar abc transporter atp-binding protein | CKY39_RS05200 | Not Available | Positive | 1152993 - 1154513 | 54145.9 |
| abc transporter permease | CKY39_RS05205 | Not Available | Positive | 1154510 - 1155544 | 35966.3 |
| galactofuranose abc transporter, permease protein yjff | CKY39_RS05210 | Not Available | Positive | 1155541 - 1156563 | 36072.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
