Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paai family thioesterase | CKY39_RS05120 | Not Available | Positive | 1133074 - 1133457 | 13820.8 |
| dmt family transporter | CKY39_RS05125 | Not Available | Negative | 1133465 - 1134439 | 33328.5 |
| lysr family transcriptional regulator | CKY39_RS05130 | Not Available | Positive | 1134583 - 1135461 | 31490.9 |
| capa family protein | CKY39_RS05135 | Not Available | Positive | 1135659 - 1140329 | 170589.0 |
| alpha/beta hydrolase family protein | CKY39_RS05140 | Not Available | Positive | 1140326 - 1141276 | 34306.0 |
| aldose epimerase family protein | CKY39_RS05145 | Not Available | Positive | 1141273 - 1142325 | 37925.7 |
| duf2798 domain-containing protein | CKY39_RS05150 | Not Available | Negative | 1142333 - 1142578 | 8753.18 |
| hypothetical protein | CKY39_RS34695 | Not Available | Negative | 1142575 - 1142697 | 4390.25 |
| lysr family transcriptional regulator | CKY39_RS05155 | Not Available | Positive | 1142826 - 1143740 | 33173.6 |
| smp-30/gluconolactonase/lre family protein | CKY39_RS05160 | Not Available | Negative | 1143737 - 1144681 | 34433.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
