Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tctb family protein | CKY39_RS05070 | Not Available | Positive | 1122365 - 1122853 | 16983.3 |
| tripartite tricarboxylate transporter permease | CKY39_RS05075 | Not Available | Positive | 1122887 - 1124398 | 52940.4 |
| bacteriohemerythrin | CKY39_RS05080 | Not Available | Negative | 1124428 - 1124940 | 19638.3 |
| yban family protein | CKY39_RS05085 | Not Available | Positive | 1125140 - 1125490 | 12664.8 |
| outer membrane protein assembly factor bame | CKY39_RS05090 | Not Available | Negative | 1125491 - 1125898 | 14910.6 |
| yada family autotransporter adhesin | CKY39_RS05095 | Not Available | Negative | 1125952 - 1127421 | 46661.1 |
| carboxymuconolactone decarboxylase family protein | CKY39_RS05100 | Not Available | Positive | 1127588 - 1127980 | 14240.1 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | CKY39_RS05105 | Not Available | Negative | 1127987 - 1131727 | 132027.0 |
| helix-turn-helix domain-containing protein | CKY39_RS05110 | Not Available | Positive | 1131887 - 1132492 | 21746.8 |
| gnat family n-acetyltransferase | CKY39_RS05115 | Not Available | Positive | 1132572 - 1133027 | 16608.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
