Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trehalose-phosphatase | CKY39_RS05020 | Not Available | Positive | 1111052 - 1111843 | 27926.8 |
| glycoside hydrolase family 15 protein | CKY39_RS05025 | Not Available | Positive | 1111840 - 1113762 | 71164.5 |
| alpha,alpha-trehalose-phosphate synthase (udp-forming) | CKY39_RS05030 | Not Available | Positive | 1113759 - 1115144 | 52450.9 |
| lrp/asnc family transcriptional regulator | CKY39_RS05035 | Not Available | Negative | 1115163 - 1115645 | 17503.2 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | CKY39_RS05040 | Not Available | Positive | 1115787 - 1117667 | 67292.7 |
| duf1266 domain-containing protein | CKY39_RS05045 | Not Available | Negative | 1117913 - 1118719 | 29642.1 |
| hypothetical protein | CKY39_RS05050 | Not Available | Negative | 1118723 - 1119244 | 18887.1 |
| hypothetical protein | CKY39_RS05055 | Not Available | Positive | 1119518 - 1119946 | 15265.5 |
| response regulator transcription factor | CKY39_RS05060 | Not Available | Positive | 1120173 - 1120856 | 25005.3 |
| atp-binding protein | CKY39_RS05065 | Not Available | Positive | 1120853 - 1122226 | 49111.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
