Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | CKY39_RS04970 | Not Available | Negative | 1101925 - 1102695 | 29165.2 |
| bluf domain-containing protein | CKY39_RS04975 | Not Available | Positive | 1102789 - 1103205 | 14814.7 |
| duf2917 domain-containing protein | CKY39_RS04980 | Not Available | Negative | 1103292 - 1103609 | 11080.2 |
| lysr substrate-binding domain-containing protein | CKY39_RS04985 | Not Available | Positive | 1103785 - 1104768 | 36513.7 |
| 5-formyltetrahydrofolate cyclo-ligase | CKY39_RS04990 | Not Available | Negative | 1104775 - 1105392 | 23029.7 |
| lytic transglycosylase domain-containing protein | CKY39_RS04995 | Not Available | Positive | 1105402 - 1107432 | 74379.2 |
| mgtc/sapb family protein | CKY39_RS05000 | Not Available | Positive | 1107434 - 1107991 | 19403.9 |
| glutathione s-transferase family protein | CKY39_RS05005 | Not Available | Positive | 1108101 - 1108787 | 25190.4 |
| ompw/alkl family protein | CKY39_RS05010 | Not Available | Negative | 1108804 - 1109541 | 25991.9 |
| multifunctional cca addition/repair protein | CKY39_RS05015 | Not Available | Positive | 1109707 - 1110978 | 46775.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
