Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l11 methyltransferase | CKY39_RS04765 | Not Available | Positive | 1057366 - 1058256 | 31546.5 |
| zinc-ribbon and duf3426 domain-containing protein | CKY39_RS04770 | Not Available | Positive | 1058339 - 1059727 | 48839.6 |
| carbohydrate kinase family protein | CKY39_RS04775 | Not Available | Positive | 1059786 - 1060688 | 32420.9 |
| histone h1-like dna-binding protein | CKY39_RS04780 | Not Available | Negative | 1060806 - 1061366 | 18164.2 |
| ribonucleotide-diphosphate reductase subunit beta | CKY39_RS04785 | Not Available | Negative | 1061566 - 1062756 | 45093.8 |
| ribonucleoside-diphosphate reductase subunit alpha | CKY39_RS04790 | Not Available | Negative | 1062969 - 1065902 | 108667.0 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | CKY39_RS04795 | Not Available | Negative | 1066230 - 1066847 | 22941.7 |
| sigma-54-dependent transcriptional regulator | CKY39_RS04800 | Not Available | Negative | 1066834 - 1068384 | 55453.2 |
| two-component system sensor histidine kinase ntrb | CKY39_RS04805 | Not Available | Negative | 1068390 - 1070087 | 61707.8 |
| pp0621 family protein | CKY39_RS04810 | Not Available | Negative | 1070084 - 1070341 | 9334.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
