Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | CKY39_RS04715 | Not Available | Positive | 1047608 - 1048762 | 41256.1 |
| metalloprotease tldd | CKY39_RS04720 | Not Available | Positive | 1048811 - 1050271 | 51402.1 |
| hypothetical protein | CKY39_RS04725 | Not Available | Positive | 1050352 - 1050891 | 18307.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS04730 | Not Available | Positive | 1051126 - 1052243 | 38139.4 |
| cupin domain-containing protein | CKY39_RS04735 | Not Available | Negative | 1052255 - 1052764 | 18588.1 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | CKY39_RS04740 | Not Available | Negative | 1052764 - 1054173 | 50076.9 |
| hypothetical protein | CKY39_RS04745 | Not Available | Positive | 1054276 - 1054872 | 22198.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS04750 | Not Available | Positive | 1054872 - 1055431 | 20474.7 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | CKY39_RS04755 | Not Available | Positive | 1055533 - 1055994 | 15561.7 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS04760 | Not Available | Positive | 1055997 - 1057345 | 47112.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
