Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipid acyltransferase family protein | CKY39_RS04670 | Not Available | Negative | 1038200 - 1039057 | 30751.3 |
| duf2809 domain-containing protein | CKY39_RS04675 | Not Available | Positive | 1039067 - 1039504 | 15984.0 |
| monofunctional biosynthetic peptidoglycan transglycosylase | CKY39_RS04680 | Not Available | Negative | 1039449 - 1040192 | 27448.4 |
| shikimate dehydrogenase | CKY39_RS04685 | Not Available | Negative | 1040189 - 1041046 | 29435.2 |
| energy transducer tonb | CKY39_RS04690 | Not Available | Negative | 1041082 - 1041933 | 31440.6 |
| ribonuclease catalytic domain-containing protein | CKY39_RS04695 | Not Available | Negative | 1041983 - 1044052 | 74496.6 |
| yqia/ycfp family alpha/beta fold hydrolase | CKY39_RS04700 | Not Available | Negative | 1044105 - 1044698 | 22365.9 |
| response regulator | CKY39_RS04705 | Not Available | Positive | 1044989 - 1045732 | 26446.7 |
| hypothetical protein | CKY39_RS34115 | Not Available | Positive | 1045850 - 1046134 | 10333.2 |
| atp-binding protein | CKY39_RS04710 | Not Available | Positive | 1046110 - 1047573 | 54047.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
