Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsl | CKY39_RS04575 | Not Available | Positive | 1013861 - 1014202 | 12726.5 |
| peptidoglycan d,d-transpeptidase ftsi family protein | CKY39_RS04580 | Not Available | Positive | 1014199 - 1015953 | 63992.0 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | CKY39_RS04585 | Not Available | Positive | 1015955 - 1017511 | 54282.6 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | CKY39_RS04590 | Not Available | Positive | 1017517 - 1018956 | 50398.9 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | CKY39_RS04595 | Not Available | Positive | 1018972 - 1020150 | 43529.4 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | CKY39_RS04600 | Not Available | Positive | 1020161 - 1022446 | 78636.3 |
| putative lipid ii flippase ftsw | CKY39_RS04605 | Not Available | Positive | 1022443 - 1023738 | 46943.9 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | CKY39_RS04610 | Not Available | Positive | 1023735 - 1024799 | 37415.6 |
| udp-n-acetylmuramate--l-alanine ligase | CKY39_RS04615 | Not Available | Positive | 1024796 - 1026259 | 50975.3 |
| d-alanine--d-alanine ligase | CKY39_RS04620 | Not Available | Positive | 1026256 - 1027227 | 34828.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
