Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerc | CKY39_RS04525 | Not Available | Positive | 1002257 - 1003177 | 34014.8 |
| class i sam-dependent rrna methyltransferase | CKY39_RS04530 | Not Available | Positive | 1003239 - 1004453 | 44119.6 |
| cobw family gtp-binding protein | CKY39_RS04535 | Not Available | Positive | 1004555 - 1005607 | 39399.9 |
| ydga family protein | CKY39_RS04540 | Not Available | Negative | 1005690 - 1007213 | 52756.9 |
| rna polymerase-binding protein dksa | CKY39_RS04545 | Not Available | Positive | 1007593 - 1008546 | 33154.7 |
| stas domain-containing protein | CKY39_RS04550 | Not Available | Positive | 1008595 - 1010244 | 59878.3 |
| atp-dependent protease subunit hslv | CKY39_RS04555 | Not Available | Positive | 1010348 - 1010893 | 19402.3 |
| atp-dependent protease atpase subunit hslu | CKY39_RS04560 | Not Available | Positive | 1010896 - 1012224 | 49003.8 |
| division/cell wall cluster transcriptional repressor mraz | CKY39_RS04565 | Not Available | Positive | 1012498 - 1012926 | 15881.1 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | CKY39_RS04570 | Not Available | Positive | 1012935 - 1013858 | 33561.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
