Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m35 family metallo-endopeptidase | CKY39_RS04430 | Not Available | Negative | 984127 - 985065 | 33773.2 |
| 2,5-didehydrogluconate reductase dkgb | CKY39_RS04435 | Not Available | Negative | 985288 - 986109 | 29091.0 |
| mfs transporter | CKY39_RS04440 | Not Available | Negative | 986170 - 987372 | 41160.6 |
| hypothetical protein | CKY39_RS33075 | Not Available | Negative | 987510 - 988439 | 34446.1 |
| hypothetical protein | CKY39_RS33915 | Not Available | Negative | 988558 - 989406 | 31231.1 |
| hypothetical protein | CKY39_RS04450 | Not Available | Positive | 989432 - 989770 | 11745.8 |
| arac family transcriptional regulator | CKY39_RS04455 | Not Available | Positive | 989907 - 990872 | 34335.6 |
| putative quinol monooxygenase | CKY39_RS04460 | Not Available | Positive | 991030 - 991320 | 10391.2 |
| alpha/beta hydrolase | CKY39_RS04465 | Not Available | Negative | 991345 - 992190 | 30693.8 |
| 2-hydroxychromene-2-carboxylate isomerase | CKY39_RS04470 | Not Available | Positive | 992355 - 992984 | 23202.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
