Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | CKY39_RS04380 | Not Available | Negative | 975984 - 976751 | 27590.0 |
| duf3311 domain-containing protein | CKY39_RS04385 | Not Available | Positive | 976919 - 977137 | 7766.59 |
| sodium:solute symporter family protein | CKY39_RS04390 | Not Available | Positive | 977134 - 978609 | 52061.0 |
| amidohydrolase family protein | CKY39_RS04395 | Not Available | Positive | 978648 - 979853 | 42546.4 |
| cyanate transporter | CKY39_RS04400 | Not Available | Positive | 979850 - 981163 | 44419.9 |
| nucleoside deaminase | CKY39_RS04405 | Not Available | Positive | 981184 - 981678 | 17500.7 |
| hypothetical protein | CKY39_RS04410 | Not Available | Negative | 981683 - 982528 | 30558.1 |
| hypothetical protein | CKY39_RS04415 | Not Available | Positive | 982670 - 983059 | 14066.7 |
| paai family thioesterase | CKY39_RS04420 | Not Available | Negative | 983085 - 983510 | 14946.1 |
| hypothetical protein | CKY39_RS04425 | Not Available | Negative | 983609 - 984118 | 18629.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
