Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fusc family protein | CKY39_RS04330 | Not Available | Positive | 965127 - 967238 | 75022.2 |
| duf1656 domain-containing protein | CKY39_RS04335 | Not Available | Positive | 967235 - 967441 | 7722.79 |
| hlyd family secretion protein | CKY39_RS04340 | Not Available | Positive | 967467 - 968390 | 32991.3 |
| efflux transporter outer membrane subunit | CKY39_RS04345 | Not Available | Positive | 968387 - 969868 | 51483.9 |
| hypothetical protein | CKY39_RS04350 | Not Available | Negative | 969899 - 970468 | 20089.4 |
| rna pseudouridine synthase | CKY39_RS04355 | Not Available | Negative | 970554 - 971282 | 26624.2 |
| mbl fold metallo-hydrolase | CKY39_RS04360 | Not Available | Negative | 971279 - 972970 | 60188.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS04365 | Not Available | Positive | 973081 - 974085 | 35396.6 |
| torf family putative porin | CKY39_RS04370 | Not Available | Negative | 974086 - 974916 | 29663.0 |
| dmt family transporter | CKY39_RS04375 | Not Available | Negative | 974967 - 975914 | 32881.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
