Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS19520 | Not Available | Negative | 4212360 - 4212704 | 11670.6 |
| Hypothetical protein | CKY39_RS19525 | Not Available | Negative | 4212709 - 4213617 | 31271.3 |
| Host specificity protein j | CKY39_RS19530 | Not Available | Negative | 4213685 - 4216312 | 92235.9 |
| Nonagvirus)_nc_042025: tail fiber protein | CKY39_RS19535 | Not Available | Negative | 4216312 - 4217493 | 42375.5 |
| Hypothetical protein | CKY39_RS19540 | Not Available | Negative | 4217493 - 4217912 | 14430.4 |
| Putative capsid and scaffold protein | CKY39_RS19545 | Not Available | Negative | 4217885 - 4218469 | 20715.8 |
| Hypothetical protein | CKY39_RS19550 | Not Available | Negative | 4218466 - 4218846 | 12940.6 |
| Putative resolvase | CKY39_RS19555 | Not Available | Negative | 4218987 - 4219580 | 21995.7 |
| hypothetical protein | CKY39_RS19560 | Not Available | Positive | 4219718 - 4220122 | 14955.6 |
| Hypothetical protein | CKY39_RS19565 | Not Available | Negative | 4220129 - 4221076 | 36132.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
