Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS03925 | Not Available | Negative | 880488 - 882505 | 73061.1 |
| glycosyltransferase family 2 protein | CKY39_RS03930 | Not Available | Negative | 882591 - 883349 | 28498.5 |
| glycosyltransferase family 4 protein | CKY39_RS03935 | Not Available | Positive | 883395 - 884486 | 40131.4 |
| acetylglutamate kinase | CKY39_RS03940 | Not Available | Positive | 884551 - 885444 | 31463.2 |
| nucleoid occlusion factor slma | CKY39_RS03945 | Not Available | Positive | 885533 - 886183 | 23484.2 |
| dmt family transporter | CKY39_RS03950 | Not Available | Positive | 886371 - 887255 | 29666.0 |
| malate/lactate/ureidoglycolate dehydrogenase | CKY39_RS03955 | Not Available | Negative | 887252 - 888310 | 36552.8 |
| uxaa family hydrolase | CKY39_RS03960 | Not Available | Negative | 888388 - 889914 | 53797.9 |
| trap transporter large permease | CKY39_RS03965 | Not Available | Negative | 889962 - 891356 | 49891.5 |
| trap transporter small permease | CKY39_RS03970 | Not Available | Negative | 891388 - 891945 | 20514.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
