Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | CKY39_RS03880 | Not Available | Positive | 872424 - 873422 | 35069.9 |
| transketolase | CKY39_RS03885 | Not Available | Positive | 873419 - 874231 | 29229.9 |
| transketolase family protein | CKY39_RS03890 | Not Available | Positive | 874228 - 875145 | 32273.2 |
| gtra family protein | CKY39_RS03895 | Not Available | Positive | 875147 - 875512 | 12811.2 |
| glycosyltransferase family 2 protein | CKY39_RS03900 | Not Available | Positive | 875509 - 876444 | 35403.2 |
| abc transporter atp-binding protein | CKY39_RS03905 | Not Available | Negative | 876501 - 877205 | 25097.6 |
| abc transporter permease | CKY39_RS03910 | Not Available | Negative | 877208 - 878011 | 30481.8 |
| hypothetical protein | CKY39_RS33670 | Not Available | Negative | 877968 - 878114 | 5134.03 |
| glycosyltransferase family 2 protein | CKY39_RS03915 | Not Available | Positive | 878368 - 879372 | 37716.4 |
| glycosyltransferase family 2 protein | CKY39_RS03920 | Not Available | Positive | 879383 - 880447 | 40539.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
