Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | CKY39_RS03830 | Not Available | Positive | 861667 - 862416 | 28491.9 |
| glycosyltransferase family 2 protein | CKY39_RS03835 | Not Available | Positive | 862413 - 863330 | 34378.0 |
| gtra family protein | CKY39_RS03840 | Not Available | Positive | 863418 - 863753 | 12526.8 |
| hypothetical protein | CKY39_RS03845 | Not Available | Positive | 863759 - 865513 | 61777.4 |
| glycosyltransferase family 61 protein | CKY39_RS03850 | Not Available | Negative | 865527 - 867236 | 65215.4 |
| acyltransferase | CKY39_RS34690 | Not Available | Positive | 867304 - 867786 | 16848.1 |
| hypothetical protein | CKY39_RS03860 | Not Available | Positive | 867824 - 869149 | 49889.9 |
| glucose-1-phosphate cytidylyltransferase | CKY39_RS03865 | Not Available | Positive | 869201 - 869974 | 28882.9 |
| cdp-glucose 4,6-dehydratase | CKY39_RS03870 | Not Available | Positive | 869971 - 871053 | 40342.4 |
| lipopolysaccharide biosynthesis protein rfbh | CKY39_RS03875 | Not Available | Positive | 871046 - 872377 | 48954.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
