Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar 3,4-ketoisomerase | CKY39_RS03780 | Not Available | Positive | 852998 - 853438 | 16705.9 |
| degt/dnrj/eryc1/strs family aminotransferase | CKY39_RS03785 | Not Available | Positive | 853440 - 854540 | 39187.0 |
| glycosyltransferase family 2 protein | CKY39_RS03790 | Not Available | Positive | 854554 - 855498 | 34226.1 |
| tetratricopeptide repeat protein | CKY39_RS33070 | Not Available | Positive | 855642 - 857216 | 57875.2 |
| hypothetical protein | CKY39_RS33665 | Not Available | Positive | 857213 - 857404 | 6973.4 |
| degt/dnrj/eryc1/strs family aminotransferase | CKY39_RS03805 | Not Available | Positive | 857426 - 858532 | 40822.3 |
| wbqc family protein | CKY39_RS03810 | Not Available | Positive | 858576 - 859262 | 26024.4 |
| hypothetical protein | CKY39_RS03815 | Not Available | Positive | 859376 - 860227 | 31961.7 |
| hypothetical protein | CKY39_RS03820 | Not Available | Positive | 860232 - 861194 | 35982.6 |
| gnat family n-acetyltransferase | CKY39_RS03825 | Not Available | Positive | 861191 - 861670 | 17248.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
