Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | CKY39_RS03730 | Not Available | Positive | 840726 - 842147 | 52072.9 |
| pham family polyhydroxyalkanoate granule multifunctional regulatory protein | CKY39_RS03735 | Not Available | Positive | 842212 - 842991 | 27377.5 |
| fist c-terminal domain-containing protein | CKY39_RS03740 | Not Available | Positive | 843041 - 844321 | 44459.8 |
| rtcb family protein | CKY39_RS03745 | Not Available | Positive | 844536 - 845951 | 50836.7 |
| d-amino acid dehydrogenase | CKY39_RS03750 | Not Available | Negative | 845971 - 847278 | 47646.0 |
| dtdp-glucose 4,6-dehydratase | CKY39_RS03755 | Not Available | Positive | 847730 - 848809 | 39923.0 |
| dtdp-4-dehydrorhamnose reductase | CKY39_RS03760 | Not Available | Positive | 848806 - 849696 | 32024.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS03765 | Not Available | Positive | 849805 - 850622 | 29575.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | CKY39_RS03770 | Not Available | Positive | 850619 - 851167 | 20175.8 |
| glycosyltransferase family 61 protein | CKY39_RS03775 | Not Available | Positive | 851350 - 852978 | 60427.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
