Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | CKY39_RS12095 | Not Available | + | 2668799 - 2670772 | 72294.7 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | CKY39_RS12100 | Not Available | + | 2670830 - 2671396 | 21149.6 |
| dmt family transporter | CKY39_RS12105 | Not Available | + | 2671393 - 2672280 | 31042.9 |
| Lysr family transcriptional regulator | CKY39_RS12110 | Not Available | - | 2672297 - 2673250 | 35111.1 |
| Hydrolase | CKY39_RS12115 | Not Available | + | 2673321 - 2674205 | 32374.6 |
| tartrate dehydrogenase | CKY39_RS12120 | Not Available | + | 2674228 - 2675313 | 39540.5 |
| Dna binding protein hu-beta | CKY39_RS12125 | Not Available | + | 2675523 - 2675795 | 9458.64 |
| Trna-val; | Not Available | Not Available | + | 2675825 - 2675900 | Not Available |
| Attl | Not Available | Not Available | + | 2675854 - 2675903 | Not Available |
| Putative integrase/recombinase protein | CKY39_RS12135 | Not Available | + | 2676072 - 2677196 | 42135.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.