Pseudomonas sp. MYb193

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. MYb193 is characterized by having a single replicon, which is indicative of its genetic structure and potential stability. The complete genomic information for this strain is available under the accession number NZ_CP023269.1. This data is critical for understanding its genetic makeup and potential applications in various biotechnological fields. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments, including soil, water, and plant surfaces. This adaptability suggests that Pseudomonas sp. MYb193 may play a significant role in its ecological niche, potentially contributing to nutrient cycling and plant health. The presence of a single replicon may also suggest a streamlined genome, which could facilitate efficient replication and expression of essential genes. This trait can enhance the organism's ability to respond to environmental stresses and may confer advantages in specific bioremediation processes or agricultural applications. Understanding the characteristics of Pseudomonas sp. MYb193, particularly its genomic structure and ecological roles, provides insights into its potential applications in environmental microbiology and biotechnology. The knowledge of its genetic information can also pave the way for future studies aimed at harnessing its capabilities for beneficial uses, such as bioremediation or as a biocontrol agent in agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. MYb193
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. MYb193
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. MYb193 chromosome, complete genome.

Gene Summary

Adenine Count

1239526 bp

Thymine Count

1250459 bp

Guanine Count

1860648 bp

Cytosine Count

1861003 bp

Genome Length

6211636 bp

Protein-coding Genes

5350 genes

Non-Coding Genes

264 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
quinone oxidoreductase family proteinCLM72_RS00105Not AvailableNegative23486 - 2446334190.8
oxygen-dependent coproporphyrinogen oxidaseCLM72_RS00110Not AvailablePositive24642 - 2557435219.3
shikimate dehydrogenaseCLM72_RS00115Not AvailablePositive25574 - 2639229166.0
sulp family inorganic anion transporterCLM72_RS00120Not AvailableNegative26411 - 2797956185.6
choline abc transporter substrate-binding proteinCLM72_RS00125Not AvailableNegative28132 - 2904633266.1
choline-sulfataseCLM72_RS00130Not AvailableNegative29065 - 3057957095.8
choline sulfate utilization transcriptional regulatorCLM72_RS00135Not AvailablePositive30683 - 3163335504.4
dopa 4,5-dioxygenase family proteinCLM72_RS00140Not AvailablePositive31664 - 3199012474.0
2-dehydro-3-deoxygalactonokinaseCLM72_RS00145Not AvailablePositive32167 - 3312633893.8
2-dehydro-3-deoxy-6-phosphogalactonate aldolaseCLM72_RS00150Not AvailablePositive33128 - 3374821288.0

Displaying genes 251 – 260 of 5614 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.