Sinorhizobium sojae CCBAU 05684

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Description

Sinorhizobium sojae CCBAU 05684 is a notable strain of bacteria characterized by the presence of flagella, which facilitate its motility. This trait is significant for its ecological interactions, particularly in soil environments where movement towards nutrient sources or host plants is critical for symbiotic relationships. The strain contains a single replicon, indicating a streamlined genetic structure that may enhance its adaptability and efficiency in its niche. This single-replicon configuration is often associated with bacteria that exhibit a high degree of genomic stability and may contribute to the organism's capability to thrive in various environmental conditions. The genomic information for Sinorhizobium sojae CCBAU 05684 is cataloged under the accession NZ_CP023067.1. This data provides a basis for further research into its genetic makeup and potential applications in agriculture, particularly in the context of legume symbiosis. Overall, the combination of flagella presence and a single replicon suggests that Sinorhizobium sojae CCBAU 05684 may possess adaptive advantages in its ecological niche, particularly in forming beneficial relationships with host plants, which can enhance nitrogen fixation in agricultural systems. This interplay underscores the importance of understanding microbial traits in promoting sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusSinorhizobium
SpeciesSinorhizobium sojae
StrainCCBAU 05684

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sinorhizobium sojae CCBAU 05684
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinorhizobium sojae CCBAU 05684 chromosome, complete genome.

Gene Summary

Adenine Count

688688 bp

Thymine Count

690578 bp

Guanine Count

1143134 bp

Cytosine Count

1149859 bp

Genome Length

3672259 bp

Protein-coding Genes

3385 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligaseSJ05684_RS10785Not AvailableNegative2187785 - 218921849513.7
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseSJ05684_RS10790Not AvailableNegative2189220 - 219067750467.1
peptidoglycan d,d-transpeptidase ftsi family proteinSJ05684_RS10795Not AvailableNegative2190840 - 219258862702.3
hypothetical proteinSJ05684_RS10800Not AvailableNegative2192588 - 219297113861.7
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhSJ05684_RS10805Not AvailableNegative2192978 - 219400336009.3
division/cell wall cluster transcriptional repressor mrazSJ05684_RS10810Not AvailableNegative2194018 - 219445816290.4
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive2194920 - 2195320Not Available
nad(p)/fad-dependent oxidoreductaseSJ05684_RS10820Not AvailableNegative2195391 - 219657842003.8
lytic transglycosylase domain-containing proteinSJ05684_RS10825Not AvailableNegative2196825 - 219735218572.7
n-acetylmuramoyl-l-alanine amidaseSJ05684_RS10830Not AvailableNegative2197578 - 219834227902.9

Displaying genes 2131 – 2140 of 3509 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.